layerfmri
I try to collect talks, papers, and news regarding layer-fMRI. Focusing on acquisition.
researchers.mgh.harvard.edu/profile/42655591/Re…
- In a satirical commentary, @ofgulban.bsky.social examines the widening gap between traditional publication norms and emerging channels of science communication: doi.org/10.52294/001... @ohbmofficial.bsky.social #FutureofPublishing #SpecialIssue
- Check out our newest demonstrating feasabilty of sub-mm whole brain EEG-fMRI at 7T. Happy to have been part of this amazing collaboration and thank you so much to Cristina and João for leading this project 😊👍.
- New paper in Imaging Neuroscience by C. Sainz Martinez, J. Jorge, et al: An optimized framework for simultaneous EEG-fMRI at 7T enabling safe, high-quality human brain imaging with millisecond temporal resolution and sub-millimeter spatial resolution doi.org/10.1162/IMAG...
- We wrote a blog post about common misconceptions of basic EPI parameters. Test your knowledge of EPI myths. layerfmri.com/epimyths/ 1/3
- This is amazing, thank you so much, @layerfmri.bsky.social and team - super helpful, esp. Fig 6&7! After 5 years, I still get puzzled by the way bandwidth and echo spacing/readout time are linked on Siemens. Maybe it’s Philips nostalgia or too much spiral acquisition - where every sample matters ;-)
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- From a few years ago but it disappeared off yt so I recently re-uploaded. SurfLayers demo. #tbt youtu.be/Py0a8O2h-gc?...
- Our review discussing the potential use of laminar fMRI for probing the role of cortical layers in epileptic seizure propagation and spread as well as it possible future clinical applications out in Brain (well as accepted manuscript!) academic.oup.com/brain/advanc...
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- For the laminauts. @layerfmri.bsky.social
- Vascular draining confounds laminar decoding in fMRI biorxiv.org/content/10.1101/202…
- Hence use VASO :-)
- Happy to see this out: our new preprint shows that laminar GE-BOLD fMRI decoding isn’t immune to vascular draining biases. Simulations reveal false positives due to multivariate signal spread across layers, but oversampling + deconvolution can (sometimes) improve specificity.
- Vascular draining confounds laminar decoding in fMRI biorxiv.org/content/10.1101/202…
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- I’m proud to share that on July 3rd, I defended my PhD thesis: "Distinct and complementary: insights on bistable perception in humans using ultra-high field MRI across multiple spatial scales." The defense stream is here: youtube.com/live/J7wmn5s... Excited for what’s next!🧠🧲🥳
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- I’m happy to share that our manuscript on the cortical depth-dependency of the GE- and SE-BOLD point spread function at 7 Tesla is now available on bioRxiv! www.biorxiv.org/content/10.1...
- I've always wanted to explore fMRI time series as a smooth, real-time movie. Now I can with LayNii IDA. Plus, with voxel-wise correlations on the fly. Fast, intuitive, and surprisingly insightful. 40 ms TR fMRI data from @practicalfmri.bsky.social ! @layerfmri.bsky.social @afni-pt.bsky.social
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- ICYMI: In this essay for our Future of fMRI series, Laurentius Huber @layerfmri.bsky.social explains how new advances in functional MRI could help to connect cells and brain areas at the mesoscopic scale. #neuroskyence #OHBM2025 www.thetransmitter.org/future-of-fm...
- Devlog #1 for LayNii IDA, a GUI for meso-(f)MRI data Featuring whole human brain MRI datasets at: • 0.8 mm functional data • 0.35 mm in vivo multi-echo anatomical data • 0.075 mm ex vivo anatomical data Chronicling the development journey of neuroimaging software. youtu.be/ZFsBljNOcyw?...
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- In this blog post I am exploring the strange tension between rigor, reach, and recognition in modern science. What we gain (and lose) by just publishing the PDFs: thingsonthings.org/just-publish...
- Grateful to these friends and collaborators who show up in the personal stories behind this post. Science communication isn’t just about clarity, it’s about connection: @sitek.bsky.social @k4tj4.bsky.social @r3rt0.bsky.social @mholla.bsky.social @layerfmri.bsky.social
- Our Siemens 7T Collaboration Scientist is moving to support the Siemens 7T Terra.X Impulse at Stanford. Siemens is rehiring for our position, located in Canada's National Ultra-High Field MRI platform cfmm.uwo.ca in London, Ontario 🇨🇦. onehealthineers.wd3.myworkdayjobs.com/SHSJB/job/OA...
[This post could not be retrieved]- In @thetransmitter.bsky.social , @layerfmri.bsky.social writes about new advances in #fMRI that allow neuroscientists to study directionality & connectivity in the human brain at the network level, info that's vital for developmental & psychiatric research. www.thetransmitter.org/future-of-fm... 🧪
- 🚨🚨🚨PREPRINT ALERT🚨🚨🚨 Neural dynamics across cortical layers are key to brain computations - but non-invasively, we’ve been limited to rough "deep vs. superficial" distinctions. What if we told you that it is possible to achieve full (TRUE!) laminar (I, II, III, IV, V, VI) precision with MEG!
- Human neuroscience research has largely overlooked the mesoscale, which bridges cells and brain areas. But new advances in fMRI technology are changing that, writes Laurentius Huber @layerfmri.bsky.social. #neuroskyence www.thetransmitter.org/future-of-fm...
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- New in LayNii v2.9.0: Introducing *LayNii IDA*, a high-performance tool for real-time interaction with ultra–high resolution MRI data. Built for speed, designed for discovery. Still early, but a big step toward the next era of 7T fMRI: higher resolution, larger datasets. github.com/layerfMRI/La...
- The real time voxel-wise correlations are inpired by AFNI's InstaCorr, and BrainVoyager's time course interaction interface, while being a completely independent implementation of the technique. @layerfmri.bsky.social @afni-pt.bsky.social @bobcoxauthor.bsky.social @rainergoebel.bsky.social
- Thrilled to announce that we received a $2.8M grant from @braincanada.bsky.social to continue our work on NeuroLibre through the Canadian Open Neuroscience Platform (@conp-pcno.bsky.social) 1/2
- A part of me wishes I was at #ismrm2025 with my friends and colleagues, celebrating their successes and hearing about their research. However, I decided to skip the annual meeting and write this post instead, hoping it will make a difference in the long run. 1/3
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- New paper in Imaging Neuroscience by Yue Wang, Peng Zhang, et al: Attenuated and delayed neural activity in cortical microcircuitry of monocular processing and binocular interactions in human amblyopia doi.org/10.1162/imag...
- Looking forward to be talking about this at ISMRM :) I will be there from Saturday to Tuesday and keen to talk about this and everything else Neurodesk!
- Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.
- The scientific community needs to develop processes to support, hire and retain researchers whose work sits between traditional fields of study, writes @avramholmes.bsky.social #neuroskyence www.thetransmitter.org/future-of-fm...
- Completely agree w/ everything @avramholmes.bsky.social lays out here. fMRI has a big role to play in helping link across scales of measurement, neural organisation and species. But for that to work, we need to incentivise the growth and development of scientists that can translate across domains.
- The scientific community needs to develop processes to support, hire and retain researchers whose work sits between traditional fields of study, writes @avramholmes.bsky.social #neuroskyence www.thetransmitter.org/future-of-fm...
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- Likely hiring one postbac trainee for @fmri-today.bsky.social's Section on Functional Imaging Methods. Give the relatively later start time for the search, I'm not yet sure how quickly this search will happen. If you are interested, apply and reach out ASAP. fim.nimh.nih.gov
- Recruitment of postbacs & postdocs in the NIH IRP has resumed. I have no additional info beyond what is publicly stated on the website. www.training.nih.gov/research-tra...
- We are recruiting for 5 permanent staff positions (Prof, Senior-, Lecturer) including for 7T-MRI. Please have a look and share widely. (Closing date: May 12) www.nature.com/naturecareer...
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- In vivo reconstruction of Duvernoy's postmortem vasculature images - Fast, high-res imaging: Whole-brain 0.35 mm MRI in <7 min at 7 T - Vessel-type specific podt-processing: Capturing large leptomeningeal, pial, and intracortical meso-veins PDF: doi.org/10.1101/2025...
- Gaby Lohmann from @mpicybernetics.bsky.social Tübingen here introduces Cylarim - a new toolbox for layer-specific whole brain statistics Thanks for the great talk organized by @layerfmri.bsky.social #UHF #fmri youtu.be/WMm1ZATMfvg?...
- WORKSHOP WEDNESDAY Register for the ISMRM Joint Workshop of the Ultra-High Field MR & Brain Function Study Groups before the early registration deadline! Register by 28 Februaryfor the early rate - members receive an additional discount! Learn more & register: ow.ly/swh250UGjhc #ISMRM #ISMRT #MRI
- Never gets old
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