Simon F. Nørrelykke
BioImage analysis and teaching Harvard Medical School |
Previously ETH, Princeton, MPI-PKS, LENS, Niels Bohr Institute, University of Oxford, Aarhus University.
https://iac.hms.harvard.edu
- Reposted by Simon F. NørrelykkeI am looking for two postdocs to join our lab - One (bio)image analyst - One cell biologist interested to work on lymphatics! The positions will open soon, be in touch!
- Reposted by Simon F. Nørrelykke🚨 Alarm!!! 🚨 AI/ML course for microscopy image analysis!!! 🧐 In 2026 at Janelia (@hhmijanelia.bsky.social), no tuition, housing and meals provided! Isn’t that borderline unbelievable?!? 20 students, ~14 TAs and lecturers 🗓️ June 4-18 2026 ✍️ Jan 15 2026 ✍️ 🔁 pls!! www.janelia.org/you-janelia/...
- Reposted by Simon F. NørrelykkeWe moved the AI@MBL course "Deep Learning for Microscopy Image Analysis" to HHMI Janelia (@hhmijanelia.bsky.social). Join us for two weeks of intense lectures, exercise, and hands-on project work! Course dates: June 4-18 2026 Application by: January 15 2026 www.janelia.org/you-janelia/...
- 📢 Apply now for the first DL@Janelia Bootcamp (June 4–18, 2026)! 2 weeks of hands-on deep learning for microscopy: train models on your own data, Python needed (no ML experience), housing + meals included, no registration fee 📍 Janelia Research Campus, VA 🗓️ Apply by Jan 15, 2026 🔗 shorturl.at/j4sgY
- Reposted by Simon F. NørrelykkeJob alert! We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks? See also on the forum: forum.image.sc/t/research-e...
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeDo you like theoretical biology, mathematical&conceptual modelling and want to apply yourself to cutting-edge research at all levels of biology, from molecules to ecosystems? Come to EMBL! Scope includes physics-based models, emergence, statistics, ML/AI embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
- Reposted by Simon F. Nørrelykke🚨 Wow, that really sounds like an amazing opportunity… If I were a bit younger, I would start preparing my application already… 😮 www.scilifelab.se/news/ready-t...
- Reposted by Simon F. NørrelykkeCome and work with us 5-year position available for a University Researcher in Bioimaging 1.11.2025-31.12.2030 abo.rekrytointi.com/paikat/index...
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeDay 1 of #bobiac2025 🐍 The day started strong with @talley.codes speaking about the Python ecosystem and uv. Students then gave short talks about their research (#coolscience). It was then time to code in Python with @sciencedoodles.bsky.social!
- First day of #bobiac2025. Six days of intensive Python based #BioImageAnalysis. Intro by @fedegasparoli.bsky.social - "This will be a long week, but it will change your life". iac.hms.harvard.edu/bobiac/2025/
- Reposted by Simon F. NørrelykkeA major KI initiative to recruit new assistant professors with outstanding proposals in all areas of medicine, biomedicine and public health. We offer an amazing research environment, great colleagues and generous startup packages. Check it out and get working on your applications! (repost please!)
- Applications are now open! We are recruiting 20 Assistant Professors in a wide range of subject areas. We're looking for early-career researchers with strong scientific merits and future potential. 🔗 All positions: ki.se/en/about-ki/...
- Reposted by Simon F. NørrelykkeAre you looking for a postdoc? I will be looking for 2-4 people after the summer to join the lab !! Do not hesitate to reach out and disseminate !!
- Reposted by Simon F. NørrelykkeCome and work with us! Super exciting and relevant projects! Become an #AI pro and do something positive for the 🌍! 👩🎓 🧑🎓 If you know someone who might be interested… please repost and/or forward this! 🙏
- 🚀 Fully-funded #PhD opportunity in Computational Biology with our @florianjug.bsky.social Group through Politecnico of Milan DADS programme! Co-supervision by Francesca Ieva. 🧬 Use #AI to decode complex biological data across scales. Apply by 9 July 👉 humantechnopole.it/en/news/1-fu...
- Reposted by Simon F. Nørrelykke‼️3 days left to apply to the Boston Bioimage Analysis Course (BoBiAC)! 💻 Get started w/Python & learn to analyze fluorescence microscopy images — no programming experience required! Fee waivers available! 🗓️ Apply by June 1st! 🌐 iac.hms.harvard.edu/bobiac/2025/
- Reposted by Simon F. NørrelykkeDeadlines extended - you can still register for the GloBIAS conference! We have extended most deadlines. Please check our webpage: tinyurl.com/mr3kx5a5! Looking forward to welcoming you to Kobe, for training, developing and discussing a broad range of BIA topics!
- Thanks to generous support from @bioimagingna.bsky.social we now have even more fee-waivers for our workshop. No funds, but want to learn? Apply below.
- 💻 Apply to our beginner-friendly Boston Bioimage Analysis Course! Get started with Python and learn to analyze fluorescence microscopy images — no coding experience required! Fee waivers available thanks to funding from @bioimagingna.bsky.social! 🗓️ Apply June 1st! iac.hms.harvard.edu/bobiac/2025/
- Reposted by Simon F. NørrelykkeBIG NEWS - for the first time ever, we're running a Bioimage Analysis Beginnings Bootcamp. Learn #bioimageanalysis from awesome folks, and gain familiarity with some new tools as well as how to pick the right tool in the first place. Aug 4th-8th - apply here (soon!) forms.gle/d2fCXsrWHVP8...
- Reposted by Simon F. Nørrelykke‼BREAKING‼ We’ve secured new funding for the Boston Bioimage Analysis Course (BoBiAC) this July at Harvard Med School! Course fees down 37%, with fee waivers for academic applicants, for an intensive hands-on intro to bioimage analysis with Python! Apply by June 1st! iac.hms.harvard.edu/bobiac/2025
- Please join in-person if you are nearby, or by Zoom if not.
- ✨We are proudly hosting 𝐏𝐫𝐨𝐟. 𝐒𝐢𝐱𝐢𝐚𝐧 𝐘𝐨𝐮 (MIT)✨ “𝐂𝐨𝐦𝐩𝐮𝐭𝐚𝐭𝐢𝐨𝐧𝐚𝐥 𝐚𝐱𝐢𝐚𝐥 𝐝𝐞𝐛𝐥𝐮𝐫𝐫𝐢𝐧𝐠 𝐟𝐨𝐫 𝐢𝐬𝐨𝐭𝐫𝐨𝐩𝐢𝐜 𝟑𝐃 𝐦𝐢𝐜𝐫𝐨𝐬𝐜𝐨𝐩𝐲” 𝐀𝐩𝐫𝐢𝐥 𝟐𝟒𝐭𝐡 @ 𝟏𝟏 𝐚𝐦 𝐄𝐃𝐓 (𝐁𝐨𝐬𝐭𝐨𝐧 𝐭𝐢𝐦𝐞, 𝐔𝐒𝐀) Join us on Zoom! harvard.zoom.us/j/9307790905...
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeYour yearly reminder to acknowledge the core facilities you use and their staff scientists in your papers. These scientists are a crucial part of the scientific ecosystem and to continue to exist they need tangible credit for their work. Plus their associated expertise adds credibility to your work.
- Reposted by Simon F. NørrelykkeWe wrote an opinion with simple, practical advice for building data exploration workflows in quantitative cell biology with @guijacquemet.bsky.social and @hanna09.bsky.social . I hope you find it useful!
- Here we share our opinions on "Practical considerations for data exploration in quantitative cell biology" journals.biologists.com/jcs/article/... Joanna, Hanna and I worked quite a bit on this piece and I hope you find it useful Many thanks to @jcellsci.bsky.social for publishing it
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Another in-person event from #GloBIAS Together with #Data Carpentry. Thanks to the GloBIAS volunteers at ISTA for organising and hosting us! #BioImageAnalysis #Python
- Reposted by Simon F. NørrelykkeAnother in-person event from #GloBIAS Together with #Data Carpentry. Thanks to the GloBIAS volunteers at ISTA for organising and hosting us! #BioImageAnalysis #Python
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- This summer, we are running a one-week intensive workshop on Python-based BioImage Analysis. Are there better ways to spend 6 days in mid-July in Boston?Probably. Would you learn as much as you will here? Probably not. Apply here: iac.hms.harvard.edu/bobiac/2025
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeJoin us for our first workshops of 2025! 📌 Workshop 1: Image analysis with ImageJ/Fiji 📆 Date: Jan 22 & 24, 2025 🔗 tinyurl.com/iac-fiji-202... 📌 Workshop 2: ImageJ/Fiji's macro language 📆 Date: Jan 28, 2025 🔗 tinyurl.com/iac-fiji-mac... 📍 Location: HMS campus, Boston Open to all—don't miss out!
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Best (and most demanding) combined microscopy and image analysis course I know of. Apply!
- We are so excited that @janfunkey.bsky.social has agreed to give the keynote seminar for @qiatcshl.bsky.social 2025 @cshlnews.bsky.social! 🔬🖥️ 🛤️ Applications due 1/31/2025. t.co/x87ngy34UC
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeI made a BioImage Analysts Starter pack. Reachout if you're missing on it 🔬💻🌐 go.bsky.app/2hPEBDuat://did:plc:xwsyj25jlw2qucwy6ko4kmar/app.bsky.graph.starterpack/3lajfqk7uwn2x
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeI don't think I saw this on social media at all: a bunch of very clever people (including our team) has put together a federated bioimage repository based on OME-Zarr with 500TB of data in 4 months! ome.github.io/ome2024-ngff...
- Like TweetDeck, but better. Because it is here and because it is free.
- Reposted by Simon F. NørrelykkeMade a starter pack for microscopy and image analysis - please (self-)nominate additions! go.bsky.app/Nwa91pCat://did:plc:o7tynxmyxsuhoeknkm7r2dul/app.bsky.graph.starterpack/3lac64fpkc52n
- Reposted by Simon F. NørrelykkeNeed a 5-15 minute break from doomscrolling? (You know you do!) Take 5 minutes and tell us how to make #bioimageanalysis #imageanalysis better!
- Have you ever analyzed a #microscope image before- even just a single one? Please take our survey on progress and places to still improve for image analysis software! #microscopy #imageanalysis #bioimageanalysis forum.image.sc/t/2024-image...
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeNew from a huge cast of amazing #bioimage analysts in the Journal of Cell Science - "The crucial role of bioimage analysts in scientific research and publication" journals.biologists.com/jcs/article/... . Hop into 🧵to learn more! (1/x) #bioimaging #microscopy #bioimageanalyst
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. NørrelykkeIf you didn't yet have enough good reasons to share your bioimage data, Matthew, Josh (@joshmoore.bsky.social), Erin, Assaf and I are here with squirrel drawings to convince you that you should do it: journals.biologists.com/jcs/article/...
- Reposted by Simon F. Nørrelykke[Not loaded yet]
- Reposted by Simon F. Nørrelykke[Not loaded yet]
