scverse
Foundational tools for omics data (mostly in python).
- We will have our next community meeting on Tue, Feb 3, 2026, 11AM CST/ 9AM PST ! Philipp A will be presenting on HoloViz: High-level tools to simplify visualization in Python. Details in 🧵
- We will have our next community meeting on Tue, Feb 3, 2026, 11AM CST/ 9AM PST ! Philipp A will be presenting on HoloViz: High-level tools to simplify visualization in Python. Details in 🧵
- We will have our first community meeting of 2026 on Tue, Jan 20, 2026, 11AM CST/ 9AM PST ! Ian Ferenc Diks (@ianfd.bsky.social) will be presenting on SingleRust: A High-Performance Toolkit for Single-Cell Data Analysis at Scale.
- We will have our first community meeting of 2026 on Tue, Jan 20, 2026, 11AM CST/ 9AM PST ! Ian Ferenc Diks will be presenting on SingleRust: A High-Performance Toolkit for Single-Cell Data Analysis at Scale.
- We’re looking for a Community Manager to help shape and support the growing scverse ecosystem. Deadline January 10, 2026! More details here: jobs.helmholtz-muenchen.de/jobposting/d...
- We will have our final community meeting of 2026 on Tuesday, 2025-12-09 at 11:00 CST/ 9:00 PST! Mikaela Koutrouli (@MKoutrouli) will wrap up a great year of meetings by giving an update on the state of scverse! Zoom registration link for the meeting: lnkd.in/dZpbKKsY
- We will have our final community meeting of 2026 on Tuesday, 2025-12-09 at 11:00 CST/ 9:00 PST! Mikaela Koutrouli (@mkoutrouli.bsky.social) will wrap up a great year of meetings by giving an update on the state of scverse! Zoom registration link for the meeting: lnkd.in/dZpbKKsY
- We wrapped up an inspiring week with a visit to NVIDIA headquarters right after the scverse conference. Huge thanks to the NVIDIA Healthcare team and @severin7.bsky.social for hosting us and for the great discussions on scaling single-cell analysis and accelerating open science ⚡️
- We will have our next community meeting on Tuesday, 2025-11-25 at 11:00 CST! Malte Kuehl (@maltekuehl.com) will be presenting on BioContextAI! More information and Zoom registration link in 🧵
- Full house for our Bi[o]hub workshop on Day 3! Communities aren’t just built, they are co-created. Together, we’re shaping an open, connected world of all-things-single-cell research, where sharing tools and ideas drives discovery.
- We will have our next community meeting on Tuesday, 2025-11-25 at 11:00 CST! Malte Kuehl (@maltekuehl.com) will be presenting on BioContextAI! More information and Zoom registration link in 🧵
- We are proud to announce that we're partnering with @biocontext.ai (biocontext.ai), a new open-source initiative for building agentic systems in biomedical research. Learn more in our announcement: scverse.org/blog/2025-11...
- We just released scanpy 1.12rc1 (scanpy.readthedocs.io/en/latest/re...) Highlights: - Dask support in `sc.get.aggregate` for pseudobatching + `highly_variable_genes(flavor='seurat_v3')` - More functions allow specifying `layers` and `obsm` - Turn off quirky behavior (new defaults for scanpy 2.0)
- We will have our next community meeting on Tuesday, 2025-11-11 at 11:00 CST! Eric Armingol will be presenting on scCellFie! More information and Zoom registration link in 🧵
- Reposted by scverse[Not loaded yet]
- Meet the keynote speakers for the 2025 scverse conference! Elham Azizi, Associate Professor of Cancer Data Research and Biomedical Engineering at Columbia University 🧵 @elhamazizi.bsky.social @columbiauniversity.bsky.social #scverse #scverse2025 #machinelearning #genomics #cancerimmunology
- We're pleased to announce that we are now offering online attendance via Zoom. Remote attendance is available for 30 USD, and you can secure your spot by registering at www.eventbrite.com/e/scverse-co.... We hope to see you online at the conference!
- We will have our next community meeting on Tuesday, 2025-11-11 at 11:00 CST! Eric Armingol will be presenting on scCellFie! More information and Zoom registration link in 🧵
- Meet the keynote speakers for the 2025 scverse conference! Erika Alden DeBenedictis, Co-founder of The Align Foundation 🧵 @erika-alden.bsky.social @alignbio.bsky.social @pioneerlabs.bsky.social #scverse #scverse2025 #StructuralBiology #Biotech #Stanford
- Meet the keynote speakers for the 2025 scverse conference! John Marioni, Head of Computation at Genentech Research and Early Development and former head of EBI 🧵 #scverse #scverse2025 #AI #DrugDevelopment #MachineLearning #ComputationalBiology #Biotech #Pharma #Genentech
- Meet the keynote speakers for the 2025 scverse conference! Panos Roussos, Professor at Icahn School of Medicine at Mount Sinai 🧵 @panosroussos.bsky.social #scverse #scverse2025 #SingleCell #SpatialTranscriptomics #Conference #Keynote
- We will have our next community meeting on Tuesday, 2025-10-28 at 18:00 CEST! @kexinhuang.bsky.social will be presenting on Biomni: Building a Virtual Biomedical Scientist. (Zoom registration link and more information in thread!) 🧵
- We will have our next community meeting on Tuesday, 2025-10-28 at 18:00 CEST! @kexinhuang.bsky.social will be presenting on Biomni: Building a Virtual Biomedical Scientist. (Zoom registration link and more information in thread!) 🧵
