Ramunas Stepanauskas
Microbial molecular ecologist with a soft spot for cell individuality
- I am excited to announce two significant improvements to SCGC services: 1. A two-fold reduction of service fees for FACS-based SAG generation. 2. Massively parallel sequencing of single cells and extracellular genetic elements using semipermeable microcapsules (SPCs). scgc.bigelow.org
- It has been gratifying to collaborate with Atrandi Biosciences in the development of a novel approach to analyze the genomes of individual extracellular genetic elements, which revealed the abundance of viruses with non-canonical DNA in the ocean: www.nature.com/articles/s41...
- I’m excited to share our effort to obtain one of the first estimates of the net rate, in physical time, of lateral gene transfer (LGT) – nature’s own genetic engineering - across a complex, global microbiome: doi.org/10.1093/isme...
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- Please consider submitting your abstract to the Microbial Processes of the Dark Ocean session at the upcoming ASLO meeting: www.aslo.org/charlotte-20...
- NSF BIO and OCE postdoc fellowships: new.nsf.gov/funding/oppo... new.nsf.gov/funding/oppo...
- I hope this in-depth comparison of single amplified genomes (SAGs) and metagenome-assembled genomes (MAGs) will help inform data interpretation and experimental design in a broad range of research projects: link.springer.com/article/10.1...
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- Reposted by Ramunas StepanauskasJust looked up whether the plural of phage is phage or phages, and found this gem of an article: www.tandfonline.com/doi/full/10....
- This is what Gemini AI has to say about microbial single cell genomics😀: A scientist peered with a grin, At a drop, a lone microbe within. No culturing woes, Just DNA she exposed, A whole genome - a humankind's win!
- 2024 Simons Postdoctoral Fellowships in Marine Microbial Ecology: www.simonsfoundation.org/grant/simons...
- Kevin Guay is adding 200 TB to Bigelow Laboratory's HPC data storage, which is very much appreciate by the SCGC team! Just keep this in perspective: that's how much microbial genomic data is stored and used in each cup of ocean water!
- Reposted by Ramunas Stepanauskaspsst... it's Friday afternoon and I know y'all are packing up, but... Application is open for the the Bioinformatics of Microbial Single Cells workshop at Bigelow Laboratory for Ocean Sciences happening in Maine next April! Check it out and apply: bigelowlab.github.io/scgc-bioinfo...
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