Excited to share our new pre-print collab w.
@rdaslab.bsky.social
Study led by Ved Topkar brilliant MD/PhD student who used biochemistry and bioinformatics to probe the relationship between Mbp mRNA structure & transport/local translation in oligodendrocytes!
biorxiv.org/content/10.110…
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https://biorxiv.org/content/10.110…
Nov 24, 2025 01:54Mbp (myelin basic protein) is the most abundant mRNA in oligodendrocytes
MBP functions in compaction, a bizarre cellular phenomenon that extrudes cytoplasm from the myelin sheath. It acts as a molecular glue between adjacent membranes. Hence, it is locally translated.
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We asked which part of the ~1.5-kb Mbp 3' UTR is important for mRNA transport?
Ved applied 2 orthogonal techniques to primary olives:
- DMS-MaPseq to solve the RNA structure
- SLAP-seq - a method he innovated combining ~270 reporters and Boyden chambers cultures
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We found a ~120-nt region sufficient for transport that we call the MLS.
Comparing to decades-old results from the Carson lab:
- Their RTS regions was not validated.
- But our MLS partially overlaps with their RLR region.
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Importantly, the MLS can be used to deliver CDS cargos throughout oligodendrocyte processes.
Here, we used EGFP as a reporter cargo.
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Next, we used mass spec to ask what proteins associate with the MLS mRNA region.
We found hnRNP-F and proteins involved in translation!
Our structure of the MLS also had the canonical hnRNP-F-binding GGG(A) motifs!
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Combined w. work from Jackie Trotter & Doug Fields Labs, we propose a RNA switch model:
- During transport, hnRNP-F binds unstructured MLS to inhibit translation.
- At the cell periphery, membrane-bound Fyn kinase phosphorylates & releases hnRNP-F to initiate translation.
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It was fantastic to work w. Ved & Rhiju! Ved was incredibly productive & received a R21 for this work.
This was a project that survived COVID, 2 lab moves, sabbatical...
We're fortunate & grateful to Brad Zuchero’s lab for help w. oligo cultures after I left Stanford 🙏
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