- New paper on arXiv! 'Topology across scales on heterogeneous cell data', From Maria Torras Perez, @torrasperez.bsky.social, Heather Harrington @haharrington.bsky.social, et al: arxiv.org/abs/2505.02717
May 23, 2025 12:09
- Perez et al introduce a novel visualisation method—persistence weighted death simplices (PWDS)—which maps topological features detected by persistent homology back to their locations in the original tissue data, enhancing interpretability
- Vectorisation weightings for persistence diagrams were shown to be a computationally efficient alternative to multiparameter persistent homology. The methodology was validated on two annotated, multiplexed tissue datasets—lupus murine spleen and COVID-19-affected human lungs.
- And it was shown that cell localisation patterns occurring at multiple spatial scales are relevant for disease progression.
- For more, check out the paper! arxiv.org/abs/2505.02717