Karin Prummel
SNSF and EMBO Postdoctoral fellow at EMBL | PhD in Dev Bio from University of Zurich | Utrecht University alumni | climbing | cycling | piano
- This 🐍 venom made so many cool multi-day live imaging sessions possible 🔬🐟🩸 @chrmosimann.bsky.social @huiskenlab.bsky.social @daetwylerstephan.bsky.social
- 🚨 Excited to share our paper 📢 @natcomms.nature.com We reveal how inflammation reshapes the human #bonemarrow niche 🦴, home of 🩸 stem cells, in the context of #clonalhematopoiesis and #myelodysplasia An amazing journey with fantastic colleagues and collaborators, thank you all! shorturl.at/ad0st
- We studied human bone marrow samples from 84 donors (age-matched healthy controls, CHIP carriers, and early MDS patients) using single-cell RNA-seq, imaging, flow cytometry, and functional co-culture assays. 🧫 The scale of human stromal niche profiling is what makes this study special! 🦴🩸🧬🔬
- Reposted by Karin PrummelAs we wait for the final version in the journal, I leave here the last version that we uploaded on bioarchive. I hope you like it! www.biorxiv.org/content/10.1...
- Reposted by Karin PrummelJoin EMBL as a research group leader in AI in biology. EMBL AI is our new initiative aiming to exploit the full potential of ML/AI-based approaches to advance our understanding of the most complex system in the known universe - life on Earth. embl.wd103.myworkdayjobs.com/en-US/EMBL/j... (1/3)
- Reposted by Karin PrummelWe are all super happy and proud to see our work on the function and evolution of the #cephalic #furrow published in @nature.com. Let me say a few things about the background and history of this work on the #Evolution_of_Morphogenesis (1/12)
- We are searching for a research technician in our group at EMBL Heidelberg! 🧫🧬🔬 For more details, see the ad. Please reach out in case of any questions. The position is ideally filled by October 1. embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
- Reposted by Karin Prummel🚨 @dkfz.bsky.social Postdoctoral Fellowships 2025 — Postdoc opening (Mall Lab) Work at the interface of neurodevelopment, epigenetic repression & cancer neuroscience. Apply: jobs.dkfz.de/en/jobs/1679... #Postdoc #Plasticity #Neurodegeneration #CancerNeuroscience
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- Reposted by Karin PrummelExcited to share our latest paper @natmethods.nature.com We present a high-throughput framework to map cellular interactions at ultra-high scale – broadly applicable from whole-organism immune response mapping to personalized therapy response prediction (1/4). www.nature.com/articles/s41...
- Reposted by Karin PrummelTo all post-docs: The Genome Biology dept @embl.org has an Independent faculty position. Fantastic place to set up your lab –great package: core funding, fantastic Ph.D. students, cutting edge core facilities & great colleagues. Closing date Sept 19th embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
- Reposted by Karin PrummelThrilled to share the story stemming from my PhD! We used mESC neural differentiation, genome editing and bulk & single-cell approaches to uncover how ZIC2 controls early neural fate by playing a dual and sequential regulatory role as a promiscous pioneer and a selective lineage-specific activator.
- Reposted by Karin Prummel🥁 New article 📢: #Mechanobiology of #development during #Drosophila #gastrulation using #Brillouin microscopy, now in @natcomms.nature.com : rdcu.be/ev6ZX Collab. w/ @Prevedel_Lab @embl.org , Maria Leptin @marialep.bsky.social, @abhisha-thayambath.bsky.social, Julio Belmonte @ncstate.bsky.social
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- Looking for an ultra-high-throughput single-cell RNA+ATAC method? 🎆 Check out our SUM-seq method, now officially out! 🧬 Showcased on macrophages, T cells, and iPSC-derived embryoid bodies; more cell types and tissues to come! 🧫 Reach out for the detailed protocol! 📝 ✨
- SUM-seq out @natmethods.nature.com ! 🚀 Ultra-high-throughput Multiplexed snATAC+RNA Used to: ⏳ link temporal macrophage GRNs to immune disease genetics 🩸 map T cell regulatory landscapes 🧬✂️ dissect TF function in hiPSC differentiation via CRISPRi/a screens doi.org/10.1038/s41592-025-02700-8 🧵
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- Reposted by Karin PrummelWant to start an independent research group? ...with core funding, outstanding facilities & a curiosity-driven culture? Join us at @embl.org We are recruiting across research themes, inc (epi)genomics, human dev bio, predictive modelling & neurobiology👇 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
- Reposted by Karin PrummelJoin us next week (Wednesday!) for the next VGZT morning/eastern session ☀️ ☕️ seminar! We are looking forward to exciting 🪰🪲 talks by: Juan Manuel Gómez @gomezjm-devmech.bsky.social and Wolfram Pönisch @wolframponisch.bsky.social 🗓️ Wednesday, Feb 12 ⏰ 18:00 JST / 10:00 CET / 9:00 UTC
