Jeremie Kalfon 👨💻🧬🤖🚀
Doing a Ph.D. AI in Bio. | Ex @WhiteLabGx @BroadInstitute @MIT | Built @PiPleteam | ML, Cancer, Genomics, Data Sci, Entrepreneur, FullStack Dev | All views are mine
- Did you know that likely most cases of multiple sclerosis (MS) are driven by the EBV virus (herpes/mononucleosis disease)? >90% of us get infected in our teens, and some will go on to develop many diseases later in life because of it. 1/6
- Reposted by Jeremie Kalfon 👨💻🧬🤖🚀[Not loaded yet]
- 🧑🎄🎄 Christmas Foundation Model Release: scPRINT-2 **One-liner:** a **20M-active-param** single-cell foundation model trained on **350M cells / 16 species / 300 tissues / 500 cell types**. 1/6
- It was a blast hosting our Nucleate Inside AI roundtable at the France Techbio 2025 event.
- 🌐🧬I am excited to present you a round table I am doing together with Matteo Marengo Gabriel Michaux as part of our emerging Nucleate Parisian chapter led by Clara Brouaux 🔥. Title: **Inside AI: Choosing the Right Path to Value Creation** 1/3
- Without double-talk and with amazing panelists🧑🔬: - Yann Fleureau, CEO, Blossom Life Sci & Founder of Cardiologs - Steven Jerome, Director, Lead of Hit Discovery, Schrödinger - Jérémy Besnard, Advisor, InFocusTx & Co-founder of Exsciencia - Sofia Dahoune, Partner at Daphni 2/3
- Next week we will see the first conference where both the main authors and reviewers are LLM Agents! This might be fun to follow: agents4science.stanf... 👀 🤖
- I am presenting my PhD work today at the conference on immuno oncology in Toulouse's CRCT Oncopole! Happy to talk about how we can use foundation models in the real world 🧬 🧑⚕️
- Proud to be a Nucleate Leader! 🚀 Being a Nucleate Leader means joining a community of peers who step up to shape the future of biotech — leading teams, driving programs, and building ventures that make real impact.
- The first 1 million prime numbers vizualized in 2D according to their prime factors (Umap) Source: johnhw.github.io/uma...
- what they sell you, what you get...
- If you are launching your biotech / techbio startup in Paris or anywhere else in the world actually, think about applying to Nucleate's Global Activator Program! 🚀 🧬 Many people to meet and things to learn from Researchers, Investors, CEOs and more!
- In 2025, deciding to have a child without full genome sequencing of both parents is borderline reckless. It costs under €400. Takes 2 minutes. Could save your child’s life. Yet >200 million people live with rare genetic diseases—many preventable by this simple test. 1/2
- I am at ISMB ECCB this week 🧬👨💻Do reach out if you are in Liverpool and want to chat about AI, target discovery and disease modelling 😊
- If you are at ICML, I would be happy to meet to talk about AI, bio, and drug discovery!
- Very happy to share that my new paper got accepted at the ICML workshop for Foundation model for Life Sciences!! www.biorxiv.org/cont... Foundation Models are being trained from atoms to molecules ⚛️, molecule chains 🧬, entire cells 🦠, and even groups of cell across tissue slices 🫁
- scPRINT is now finally on the Chan Zuckerberg Institute's Model Hub! 🎉 🧬 🌈 It is one more way you can use this cell foundation model to embed, denoise, predict cell type, get gene networks from your data from scratch, or fine-tune it on your own application / usecase: virtualcellmodels.cz...
- Thanks to @GenBioAI to let me present my work on scPRINT and to have synthetised it so expertly in their blog post: genbio.ai/scprint-ge... Watch the full presentation here: www.youtube.com/watc...
- I see people want to compete with scDataLoader... arxiv.org/abs/2506.0...
- The first convincing example I saw of why one would want to map across species: www.biorxiv.org/cont... 1/2
- cool cryoEM+ML talk Showing the future of the protein structure data modality and by doing-so, where structural models like AF3 will go next and how they might be trained www.youtube.com/watc...
- As part of my research, I believe that scientific outreach is essential. Last week, I had the pleasure of presenting how AI can help us understand biology and the cell at Pint of Science 2025! I also put together a short video recap (in French) for those curious: youtu.be/fc8L8Dn_7tw... 1/2
- As part of my research, I believe that scientific outreach is essential. Last week, I had the pleasure of presenting how AI can help us understand biology and the cell at Pint of Science 2025! I also put together a short video recap (in French) for those curious: youtu.be/fc8L8Dn_7tw... 1/2
- Great to see my work featured on the CNRS website! Read more at www.nature.com/articles/s41...
- #RésultatScientifique 🔎 Une IA pour lire le langage des cellules ! 🧬 Grâce à scPRINT, des chercheurs décryptent les réseaux de gènes qui contrôlent les états cellulaires à partir de millions de données single-cell. buff.ly/XMcDog0
