Isaia Vardanega
Plant biologist🌾
- Reposted by Isaia VardanegaNew Article: "Imputation integrates single-cell and spatial gene expression data to resolve transcriptional networks in barley shoot meristem development" rdcu.be/eYiMF With Research Briefing rdcu.be/eYiM7
- Reposted by Isaia VardanegaIt's finally out!... Using single-cell and spatial transcriptome data, and data imputation, we created BARVISTA, a website able to perform almost genome-wide information on gene expression profiles at single-cell resolution in barley spikes! www.nature.com/articles/s41...
- Reposted by Isaia VardanegaHappy to share our recent thoughts on how grasses form and pattern stomata doi.org/10.1016/j.pb... 🌾From fate establishment, through within-file patterning to dumbbell formation🌾 Congrats to @lbmountain.bsky.social on getting two publications out in a single day - a first for the lab!
- Reposted by Isaia VardanegaA wonderful collaboration with our colleagues from Düsseldorf within the @cerealcell.bsky.social consortium. @isaiavardanega.bsky.social @simonrdg.bsky.social Jan Maika. Thanks to the sequencing facilities at Uni Heidelberg and Uni Bern, and past and present team members for this "tour de force"
- Reposted by Isaia VardanegaI’m proud to present the main work from my postdoc, 3+ years in making from scratch, my ultimate #MimulusPropaganda up till now: The Moment That Symmetry Breaks. #plantscience #development #imaging #microscopy 🧪🌸🔬 w. Captain Yaowu & @biancatash.bsky.social www.biorxiv.org/content/10.1...
- From Tip to Grain: Sculpting Barley Inflorescence Through the Regulation of Meristem Activity thenode.biologists.com/from-tip-to-...
- Reposted by Isaia VardanegaMeristems shape plant architectures, and grasses generate a complex array of them. To characterise barley vegetative SAMs and spike development, we used single cell and spatial transcriptome data and integrated them in a new database, BARVISTA. A click on a cell now..... tinyurl.com/38c3mf5d
- Reposted by Isaia Vardanega#PlantScience Research Weekly: May 23, 2025 plantae.org/plant-scienc... Lost in translation; How to eat an idea; RNA editing in mitochondria; Non-destructive ubiquitin tagging by COP1; When CLV walked in fields of gold (1/2)
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View full threadReposted by Isaia Vardanega
- Reposted by Isaia VardanegaI am thrilled to share our work on integrating single-cell and spatial transcriptomics. Here, we assign a spatial position to protoplasts by gene expression imputation, allowing us to dissect regulatory networks during meristem and organ determination in barley. www.biorxiv.org/content/10.1...
- Excited to see our work finally out! 🌾🏴☠️ We show how HvCLV1 and HvFCP1 shape barley inflorescence using innovative techniques and some cool microscopy. Huge thanks to everyone involved in this study! t.co/ofButB3fRo
