Hasindu Gamaarachchi: This new Hifiasm --ont option is amazing. It worked like a charm for us in the nanopore adaptive sampling based assembly paradigm we introduced in a preprint recently. www.biorxiv.org/content/10.1...

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Hasindu Gamaarachchi hasindu2008.bsky.social
This new Hifiasm --ont option is amazing. It worked like a charm for us in the nanopore adaptive sampling based assembly paradigm we introduced in a preprint recently. www.biorxiv.org/content/10.1...
Adaptively integrated sequencing and assembly of near-complete genomes

Recent advances in long-read sequencing (LRS) and assembly algorithms have made it possible to create highly complete genome assemblies for humans, animals, plants and other eukaryotes. However, there...

biorxiv.org
- Heng Li lh3lh3.bsky.social · Apr 18, 2025
  Preprint on hifiasm Nanopore-only assembly. Led by Haoyu Cheng: www.biorxiv.org/content/10.1...
  Efficient near telomere-to-telomere assembly of Nanopore Simplex reads
  
  Telomere-to-telomere (T2T) assembly is the ultimate goal for de novo genome assembly. Existing algorithms capable of near T2T assembly all require Oxford Nanopore Technologies (ONT) ultra-long reads w...
  
  biorxiv.org
Apr 19, 2025 02:31
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