Big Fantastic Virus Database (BFVD) version 2 improves 31% of predictions through 12 ColabFold recycles. PAEs and MSAs now also available for download and in the webserver.
🌐https://bfvd.foldseek.com
💾https://bfvd.steineggerlab.workers.dev/
1/3
V1 improved 178k predictions with <30 homologs in Base-MSA by adding Logan hits. V2 improves confidence through 12 recycles. For each target, we chose the best pLDDT pred from Base, +Logan and +12-recycles. ~4% improved from (very)low to (very)high confidence. Q70LC3 now aligns closely with PDB. 2/3
Special thanks to
@milot.bsky.social ,
@martinsteinegger.bsky.social , @eli for their kind help and guidance in making this update possible.
