CrowDsourcing COndensate Database & Encyclopedia
CD-CODE is a comprehensive, manually-curated database for biomolecular condensates and proteins developed by Agnes Toth-Petroczy lab @tothpetroczylab.bsky.social @mpi-cbg.de
https://cd-code.org
- Our pre-holiday database update is live! 🎄CD-CODE v2.1 is here. Adding 🎁 11 new condensates 🎁 276 new proteins We now track a total of 13,983 condensate-protein relationships, plus 253 c-mods and 113 condensatopathies. Dive into the data and see more details about the release: cd-code.org/release
- Reposted by CrowDsourcing COndensate Database & EncyclopediaOur enhanced knowledge base for condensates is online @narjournal.bsky.social! Congratulations to the first authors @kkuznetsova.bsky.social and @mscheremetjew.bsky.social and all co-authors & curators! What a wonderful team effort to advance condensate research! 🤩 @mpi-cbg.de @hymanlab.bsky.social
- CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩 CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies 👀 doi.org/10.1093/nar/...
- CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩 CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies 👀 doi.org/10.1093/nar/...
- CD-CODE is a great example of an interdisciplinary teamwork between computational and experimental biologists and software engineers! #Thankyou to all the authors of @tothpetroczylab.bsky.social, the biomolecular condensate community of @mpi-cbg.de, @hymanlab.bsky.social, and Dewpoint Therapeutics!
- 💡With a #relational structure, programmatic access #API and improved search capabilities, CD-CODE 2.0 easily integrates into #datascience and digital #biology workflows, broadening its versatility and creating connections between condensate biology and #therapeutic development. 🔗 cd-code.org
- ☀️summer is here - and so is CD-CODE v1.10 release!🤩 💡CD-CODE has now 719 manually curated #condensates (and ~40% are #human associated!) 💡Check out new #condensates and updated #protein - condensate connections at cd-code.org #Bioinformatics #DatabaseUpdate #IDR #RNP #RBP #cdcode
- The latest release was supported by the #condesathon joined by @mpi-cbg.de condensate community🤩 Big #thankyou to all the participants from @hymanlab.bsky.social, @tothpetroczylab.bsky.social and von Appen labs for your support and enthusiasm!💜
- Reposted by CrowDsourcing COndensate Database & Encyclopedia😊 I had the pleasure to turn this exciting @cellpress.bsky.social paper into a video-abstract. Check it out! youtu.be/0REvwcuOao8 Thanks to the authors for writing the script and to @hymanlab.bsky.social and to @mpi-cbg.de for sharing it!
- Related science sketch video by @marionamec.bsky.social www.youtube.com/watch?v=0REv...
- We're really excited that CD-CODE is now cross-referenced by #UniProt and has already been included in the latest release: www.uniprot.org/release-note... Spreading knowledge about #biomolecular #condensates 🥳 @ebi.embl.org @sib.swiss @mpi-cbg.de @tothpetroczylab.bsky.social @hymanlab.bsky.social
- Reposted by CrowDsourcing COndensate Database & EncyclopediaThe @tothpetroczylab.bsky.social together with the @albertilab-tud.bsky.social developed SHARK-capture to detect recurring patterns (motifs) in intrinsically disordered protein regions (IDRs). Publication in Protein Science. www.mpi-cbg.de/news-outreac...
- Reposted by CrowDsourcing COndensate Database & Encyclopedia🚀 Exciting Opportunity 🚀 Do you have a passion for structural biology? We're hiring at @PDBeurope! 🌟 Apply now to help annotate biological data 💻 🔬 🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d... Closing date: April 6, 2025 #JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
- 🍃CD-CODE update v1.09 is here!🍃 👀Check out the new #biomolecular #condensates at cd-code.org 👀We're continuing to update #Protein - #condensate connections and resolve issues! Join us to share your #condensate #expertise as a contributor: cd-code.org/signup #Bioinformatics #DatabaseUpdate #IDR
- Reposted by CrowDsourcing COndensate Database & EncyclopediaThe research group of Agnes Toth-Petroczy @tothpetroczylab.bsky.social is looking for an experimental Postdoc (m/f/d) in protein evolution of biomolecular condensates. Apply now! careers.mpi-cbg.de/jobs/5312959...
- Reposted by CrowDsourcing COndensate Database & EncyclopediaFollow our research group leaders @mpicbg.bsky.social to get updates on their science activities! go.bsky.app/3gGPAgMat://did:plc:adqbvpbnclilt6kvoux5o2hf/app.bsky.graph.starterpack/3lgsfplpk7e2s
- Reposted by CrowDsourcing COndensate Database & EncyclopediaGet news from science institutes and universities, located in Dresden, Germany. Please add missing ones in the comments. go.bsky.app/BgRhagpat://did:plc:adqbvpbnclilt6kvoux5o2hf/app.bsky.graph.starterpack/3lgsosmspid2p
- Reposted by CrowDsourcing COndensate Database & EncyclopediaWe are looking for a Student Helper in International Culture and Policies. Apply now and join us! careers.mpi-cbg.de/jobs/5276094...
- Reposted by CrowDsourcing COndensate Database & EncyclopediaOur PICNIC tool predicts condensate-proteins regardless of their structural disorder across organisms @naturecomms.bsky.social. Congratulations to @annaha-poetry-art.bsky.social for developing the algorithm and to Hari @hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
- ✨Winter CD-CODE update to v1.08!✨ ❄️ New #biomolecular #condensates added (total ⚪: 680) ❄️ #Protein - #condensate connections updated ❄️ Species attributes fixed 🤩 👀Check the current version here: cd-code.org Join us to become a contributor: cd-code.org/signup #DatabaseUpdate #Bioinformatics #IDR
- Congratulations, Agnes! 🤩
- Reposted by CrowDsourcing COndensate Database & EncyclopediaIf you are a PhD student and like protein disorder (or want to learn more), Birthe Kragelund @bbkrage.bsky.social and Kristian Strømgaard are organizing a PhD course on How IDPs work 🧶🧬🧪 Note the cost if you are not at a Danish university. Details: phdcourses.ku.dk/DetailKursus...
- Reposted by CrowDsourcing COndensate Database & EncyclopediaHello Bluesky! We're thrilled to announce an open PhD position on exploring controlling condensate membrane attachment and exocytosis! Collaborate across Europe in the ComeInCell EU network. Apply now! Details: www.comeincell.org & www.ru.nl/en/working-a...
- Thank you, @rnadavid.bsky.social for compiling this starter pack 🤩 Join the condensate crowd! #condensates #phaseseparation #granules #IDPs
- Biomolecular condensate starter pack! Trying to compile & to bring together biomolecular condensate enthusiasts & critics! Please join this non-exhaustive (sorry!) collection & just ping me for addition. #condensates, #phaseseparation, #granules, #IDPs go.bsky.app/NFqmffaat://did:plc:km64wfqyt7i6psfcqlvxkkxg/app.bsky.graph.starterpack/3lb7mosqsg32h
- Reposted by CrowDsourcing COndensate Database & EncyclopediaThe Martin lab has an open postdoc position at the interface of #cytoskeleton and #condensate biology, in a fantastic research community! If interested, do not hesitate to contact us: mocel.unige.ch/research-gro... Please RT!
