Microbiome
A family of open access journals from BioMed Central (BMC) that seek to unite investigators conducting microbiome research in environmental, agricultural, and biomedical arenas🦠
- In #Microbiome 🦠Introducing the Waltham catalogue for the canine gut microbiome 🚨A complete taxonomic and functional catalogue of the canine gut microbiome through novel metagenomic-based genome discovery 👉 doi.org/hbkt35 #OpenAccess
- In #AnimalMicrobiome 🔍Exploring the protective role of crocodile gut microbiome media on kidney health in a hindlimb unloaded mouse model 🚨Demonstrating potential therapeutic benefits in mitigating renal injury induced by simulated microgravity ➡️ doi.org/qpcr #OpenAccess
- In #EnvironmentalMicrobiome 🔍Investigating how cotton–mustard intercropping modulates the root microbiome and suppresses Verticillium wilt 🦠Highlighting the potential of microbiome‑based strategies for sustainable soilborne disease management 👉 doi.org/qpp6 #OpenAccess
- In #Microbiome 🔍Investigating bacterial defense system dynamics across urban wastewater treatment processes 🚨Discovering that plasmid-associated defense systems can persist through shared mobile genetic reservoirs 👉 doi.org/qpp5 #OpenAccess
- In #AnimalMicrobiome 🔍Exploring the role of toll-like receptor 2 (TLR2) in regulating the microbiome 🚨TLR2 shapes gut microbial diversity, composition, and metabolic potential ➡️ doi.org/qn2s #OpenAccess
- In #Microbiome 🔍Profiling the microbial plasmidome and resistome on 78 samples across European urban water systems 🦠Bacteroides emerged as a major driver of antimicrobial resistance dynamics across different wastewater treatment processes ➡️ doi.org/qn2v #OpenAccess
- In #EnvironmentalMicrobiome 🔍Investigating the interaction between organic amendments & soil texture in agricultural soils used for arable production 🚨Highlighting the need for tailored management strategies to promote soil health ➡️ doi.org/qn2t #OpenAccess #Microbiome #Soil #Agriculture
- In #Microbiome 🔍Exploring the composition and dynamics of the adult nasal microbiome🦠 🚨Host factors, including age and biological sex, significantly shape microbiome dynamics ➡️ doi.org/qn2w
- In #AnimalMicrobiome 🔍Decoding the dynamics of calves’ respiratory & gut microbiota: exploring stability, resistance & individual patterns 🚨The first month of life is a critical window for interventions targeting the fecal microbiota Read more ➡️ doi.org/qm7t #OpenAccess
- In #Microbiome 🚨Gut bacteria regulate the immune system, including the induction of defense proteins called antibodies 🦠Mice with high IgA production specific to B. fragilis exhibited significantly fewer abscesses from the injection of bacteria Read more 👉 doi.org/qm8r #OpenAccess
- In #EnvironmentalMicrobiome 📝Evaluating the level of consensus between different strategies for exploring marine viruses 🚨PacBio HiFi in combination with Illumina seem to perform the best in absolute recovery of viral species & genera Read more 👉 doi.org/qm8s #OpenAccess
- In #Microbiome 🚨Interactions among wastewater microbes could impact antibiotic resistance 🦠Viral & protist communities shifted throughout the year, leading to seasonal changes in the bacterial community Read More 👉 doi.org/qm8q #OpenAccess
- In #AnimalMicrobiome 🔍Exploring the effects of naturalistic housing conditions on amphibian growth & microbiome in captivity 🦠Demonstrating that feces may be useful as a biomarker to understand & monitor gut/host health 👉 doi.org/qk8z
- In #Microbiome 🔍Exploring how viral makeup & the potential for viral spread from rodents to other animals are influenced by their habitats 🚨Habitat differences accounted for 38.8% of the variation in viral community composition Read more 👉 doi.org/qmkv #OpenAccess
- In #EnvironmentalMicrobiome 🚨Fungi dominate eukaryotic microbial assemblages in hot spring biofilms of East and Southeast Asia Read more 👉 doi.org/qmc2 #OpenAccess #Fungi #Microbiology #Eukaryotes #HotSprings
- In #Microbiome 🚨Introducing MicroPhrophet: a personalized, temporal‑aware framework that accurately forecasts microbial abundance trajectories from incomplete longitudinal data, without the need for data imputation Read more 👉 doi.org/qk8x #OpenAccess
- In #AnimalMicrobiome 🔍Investigating the blood microbiome of clinically healthy wild buffaloes in Kenya 🦠Buffaloes harbour diverse bacteria in their blood, including some potential pathogens 👉 doi.org/g9bv29 #OpenAccess
- In #Microbiome 🚨Red seaweed supplementation suppresses methanogenesis in the rumen, revealing potentially advantageous traits among hydrogenotrophic bacteria Read more👉 doi.org/hbbp55 #OpenAccess
- In #EnvironmentalMicrobiome 🔍Rapid and sustained differentiation of disease-suppressive phyllosphere microbiomes in tomato following experimental microbiome selection🍅 Read more 👉 doi.org/qjzv
- In #Microbiome 🚨Interactions between two bacterial species help shape the gut microbial community 🦠F. varium inhibits F. prausnitzii through two linked mechanisms: reduced pH & β-hydroxybutyric acid production Read more 👉 doi.org/g9vv6z #GutMicrobiome #Faecalibacterium
- In #AnimalMicrobiome 🔍Exploring the relationship between the gut bacteriome & reproductive performance in beef cattle🐄 🚨Artificial insemination numbers can be inferred from fecal bacterial patterns nearly six months in advance Read more 👉 doi.org/phj7
- In #Microbiome 🚨Microbiome stability impairs oral health in children living with HIV 🔍Sampling individual teeth from a cohort of 565 Nigerian children with varying levels of tooth decay severity Read more 👉 doi.org/psbb #OralMicrobiome #DentalMicrobiome #OralHealth #HIV
- In #EnvironmentalMicrobiome 🌲Norway spruce needles contain biomineralized gold (Au) nanoparticles 🚨Au-nanoparticles are linked with endophytic bacteria, suggesting microbes may influence plant biomineralization Read more 👉 doi.org/g95zgw
- In #Microbiome 🚀Investigating unique bacteria inhabiting NASA cleanrooms 🚨Resulting in 215 cultivable extremotolerant bacterial strains, including 53 new strains spanning to 26 completely novel species Read more 👉 doi.org/g9h7sx #Bacteria #Astrobiology #SpaceMicrobiology #NASA
- In #AnimalMicrobiome 🚨Presenting the EGG database: a novel dataset of 2,362 equine fecal microbiomes from veterinary teaching hospitals across 3 countries 🦠A valuable resource to study to equine microbiome & its role in equine health Read more 👉 doi.org/qh8s #OpenAccess
- In #Microbiome 🦠Metagenomic profiling of airborne microbial communities from aircraft filters & face masks 🚨Identifying both common human-associated bacteria & environmental species, highlighting the impact of human activity on microbial dispersal Read more 👉 doi.org/hbdgw2 #OpenAccess
- In #EnvironmentalMicrobiome 🔍Peptide nucleic acid (PNA) clamps enhance root microbiome profiling in wheat and maize 🚨The most substantial increase in prokaryotic read abundance was observed at a PNA concentration of 1.0 µM Read more 👉 doi.org/qjcg #OpenAccess
- In #Microbiome 🔍Characterizing the microbial communities in streams across North America based on genetic information 🚨Microbial activity can be influenced by factors like sediment composition & temperature 👉 doi.org/qh83 #OpenAccess
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- In #AnimalMicrobiome 🚨Exploring the impact of early-life rearing conditions on the porcine gut microbiota & immune system 🦠Observing a potential shift towards inflammation & altered haematology associated with the microbiota Read more👉 doi.org/qh8q #OpenAccess
- In #Microbiome 🚨Microbiota insights in endometriosis 📝Examining the profound immune dysregulation associated with endometriosis and exploring its potential bidirectional relationship with the microbiota Read more 👉 doi.org/qh82 #OpenAccess
- In #EnvironmentalMicrobiome 🔍Examining the differences in silage quality between leguminous & gramineous plants 🚨Revealing the differences in terms of fermentation quality, bacterial diversity, functional profile & co-occurrence network 👉 doi.org/qjcf #OpenAccess
- In #Microbiome 🔍Investigating the role and mechanisms of gut microbiota in salivary microbiota-affected colitis 🦠Gut microbiota was a key factor in PSM-exacerbated colitis, which was by activating macrophage to secrete CXCL3 👉 doi.org/qh8z #OpenAccess
- In #AnimalMicrobiome Gut dysbiosis after successive administration of florfenicol-medicated feed alters intestinal inflammatory response and growth patterns in healthy Atlantic salmon (Salmo salar)🦠 Read more👉 doi.org/qf64 #OpenAccess #Microbiome #AtlanticSalmon #GrowthPatterns
- In #Microbiome 🦠Host genes and keystone microbes linked to wilt tolerance in olive trees 🚨Presenting a novel framework combining co-occurrence network analyses and transcriptome-microbiota correlations Read more 👉 doi.org/qf63 #OpenAccess
- In #EnvironmentalMicrobiome 🦠Using 16S rRNA and metagenomic sequencing technologies to examine the metabolic regimes of microbial communities during water regulation and non-regulation periods in river–lake systems Read more 👉 doi.org/qf65 #OpenAccess
- In #Microbiome Investigating the functional composition of the microbiomes of Antarctic sponges, focusing on cold adaptation🦠 Highlighting the evolutionary importance of horizontal gene transfer in shaping microbial symbioses in extreme environments 👉 doi.org/qf62 #OpenAccess
- In #AnimalMicrobiome Probiotic effect of B. subtilis PS-216 in broiler chickens: modulation of weight, feed conversion, short chain fatty acids, microbiota and meat quality🐔 Read more 👉 doi.org/qfj6 #OpenAccess #Microbiome #Microbiota #Probiotics
- In #Microbiome 🔍Investigating whether corals near cold seeps associate with related bacteria 🚨The first documented association between chemoautotrophic symbionts and corals at seep Read more👉 doi.org/qfkb #OpenAccess
- In #EnvironmentalMicrobiome 🔍Conducting a seasonal investigation in mangrove sediments of the Futian Natural Reserve 📢Highlighting that salinity is a key environmental factor mediating methane emissions in mangroves Read more👉 doi.org/qfj8 #OpenAccess
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- In #Microbiome 🔍Conducting a comprehensive analysis of the gut microbiota in non-human mammals 🚨Animals living in harsh environments are promising sources for the discovery of novel biological functions of gut residing microbes Read more 👉 doi.org/qfj9 #OpenAccess
- In #AnimalMicrobiome Microbiota-gut-brain axis in avian parenting: gut microbiome associates with nest-construction behavior and neural gene expression in a songbird🦠 Read more👉 doi.org/qd8p
- In #Microbiome 🔍Using microbiome data as evidence in sexual assault cases 🦠Using a prediction model based on microbiome of 3043 women, intercourse was predicted with 71% accuracy in a balanced cross-validation machine learning setting Read more👉 doi.org/qfhz #OpenAccess
- In #EnvironmentalMicrobiome 🦠Could air pressure be a key driver of plant-specific microbial response in the rhizosphere? 🚨Highlighting a critical yet often overlooked driver of plant–microbe dynamics during uphill range shifts Read more👉 doi.org/qd8q #OpenAccess
- In #Microbiome 🚨The lung microbiome fights back against invading bacteria 🦠Identifying the metabolite of L. plantarum and L. murinus, extracellular polysaccharides, as the key immunomodulatory molecules Read more👉 doi.org/qd8s #OpenAccess
- In #AnimalMicrobiome🐇 Coprophagy prevention interfered with intestinal barrier, lipid metabolism, & immune performance in rabbits via microbe-gut-liver axis Read more👉 doi.org/qc6r #OpenAccess
- 🚨Science meets fiction: the #microbiome and super powers This hypothetical blog from the BugBitten Archives speculates on the role our microbiota could have in enhancing our abilities📝 Read more: communities.springernature.com/posts/from-t...
- In #Microbiome Corals and feather stars share nitrogen-cycling microbes🪸 🚨Using #genetic sequencing, researchers discovered a new #bacteria species that may be able to convert #nitrate into ammonia Read more 👉 doi.org/qdfk #OpenAccess
- In #EnvironmentalMicrobiome 🔍Profiling microbiome composition across the #rhizospheric, #phyllospheric & #soil compartments of A. sinicus 🦠Highlighting the intricate interactions between plants, #microbes & their environment Read more👉 doi.org/qdf4 #OpenAccess
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- In #Microbiome 🚨Hydrogels are revolutionizing the way we study gut microbes Evaluating the advantages & limitations of hydrogel-based systems to support their use in microbiome research🦠 Read more👉 doi.org/qdfb #OpenAccess
- In #Microbiome 🚨Introducing an "inside-out" framework to explore the functional & ecological parallels between plant rhizosphere and gut microbiomes 🦠Emphasising the potential for cross-disciplinary innovation Read more👉 doi.org/pzdz #OpenAccess
