Jose M Jimenez-Gomez
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- Reposted by Jose M Jimenez-GomezWe (Nordborg & Weigel labs) need input on the next generation of genome browsers & data download modes for the #Arabidopsis #1001GenomesPlus project. We have now a curated collection of over 500 long read genomes. Please help us by filling out this questionnaire: docs.google.com/forms/d/e/1F...
- Reposted by Jose M Jimenez-GomezNew preprint from the lab on @biorxivpreprint.bsky.social! We show how SEPALLATA MADS-box genes in tomato functionally diverged to regulate inflorescence and floral organ development while maintaining redundant functions in conferring floral meristem identity. www.biorxiv.org/content/10.1...
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- Reposted by Jose M Jimenez-GomezI recently moved my lab to Purdue University and am looking for graduate students. We are working at the interface of population genomics, quantitative genetics and functional genomics to understand how plants adapt to extreme environments. Reach out if you would like to discuss potential projects.
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- Reposted by Jose M Jimenez-GomezI’m very pleased to share our latest work, led by the talented @cbuckley.bsky.social as part of his PhD. It’s our first attempt at studying #circadian rhythms in wheat with the help of some great collaborators @jesshyles.bsky.social @adaevo.bsky.social et al. #plantsci 🌾⏰ 1/7 doi.org/10.1111/nph....
- Save the date, 1-3 July 2026, for the XVIII Plant Molecular Biology Meeting #RBMP2026 in Bilbao. Check out the website for updates rbmp2026.com/RBMP/en/info
- Reposted by Jose M Jimenez-GomezOut after peer review, collaborative study from Nordborg & Weigel labs with help from many others. Not the largest collection of new Arabidopsis thaliana genomes, but we hopefully put forward some good ideas for how to think about pangenomes and their analysis! www.nature.com/articles/s41...
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- We just published our work in #ScienceAdvances "Parallel evolution of salinity tolerance in Arabidopsis thaliana accessions from Cape Verde Islands" www.science.org/doi/10.1126/... Short summary and credits follow:
- We performed metabolite QTL analysis in a plant population derived from Cape Verde Islands (Cvi-0) and central Europe (Col-0). The strongest QTL is in an unidentified metabolite. We characterize the metabolite as glucuronyl-mannose, and we map the gene to a glycoside hydrolase family 38 (GH38cv).
- Reposted by Jose M Jimenez-GomezOur story about salinity tolerance in the Cape Verde islands is out in Science Advances! @science.org. Two independent mutations in the same gene conferred salt resistance to Arabidopsis plants! Check it out here! www.science.org/doi/10.1126/...
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- Reposted by Jose M Jimenez-GomezOur work on MYBs and WRKY regulating suberin in tomato exodermis is now out in @jxbotany.bsky.social! 🍅 doi.org/10.1093/jxb/... 👩🔬 @leonardojo.bsky.social @riannekluck.bsky.social @marianasartur.bsky.social Sara Buti, Alex Cantó-Pastor @bradylabs.bsky.social 🌱 #PlantScience
- 🧨Pre-print alert!🧨 We investigated the role of three TFs in tomato 🍅 exodermis suberin, and we found some MYB/WRKY antagonism! doi.org/10.1101/2024... (1/5)
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- Lots of #arabidopsis mixed with the #tulips in the #JardinBotanico in #Madrid. I asked the local expert Carlos Alonso-Blanco: they likely came from Holland with the bulbs or the soil 🤦🏻
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- Reposted by Jose M Jimenez-Gomez🚨Job alert: We are looking for a #phd student to join us @unil.bsky.social to study evolution & function of gene regulatory sequences in the context of crop domestication using genome editing and imaging 🌱🍅🧬. #plantscience #scijobs #plantscijobs. Apply here: tinyurl.com/mrdpm5yf
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- Reposted by Jose M Jimenez-GomezBluetorial-A dream and a bit of a nightmare Serving as Editor-in-Chief at Science was fascinating. I greatly enjoyed working with talented and committed editorial, news, graphics, and production staff. But the inside look into scientific publishing and AAAS was also deeply disillusioning.
- Reposted by Jose M Jimenez-GomezAnnouncing a curated collection of long-read genomes for Arabidopsis thaliana: The 1001 Genomes Plus Project. Currently 453 unique accessions/almost 600 assemblies. Interested in contributing? Please contact us! #plantscience www.biorxiv.org/content/10.1...
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- Reposted by Jose M Jimenez-GomezSon hormigas resolviendo un problema geométrico y es para flipar en colores.
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- Reposted by Jose M Jimenez-GomezThe Salk Institute shared the sad news that Prof. Joanne Chory passed away yesterday due to complications from Parkinson’s disease. She was one of the most influential biologists of our time. And this is how I will remember Joanne, expertly guiding us on where to go. Joanne, we will miss you! ❤️
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- Reposted by Jose M Jimenez-GomezNew preprint up! We sequenced hundreds of samples from across one of Earth's oldest living organisms - the Pando aspen clone - to understand how mutations accumulate and spread in long-lived clonal organisms. Our results were…surprising. 1/30
