- Day two of #CBIAS2025 kicked off by @lankylaste.bsky.social from @crick.ac.uk and the first session is on physical and mathematical modelling chaired by @natalieah.bsky.social , with the first presenter Ewa Paluch from @cam.bsky.social
- Digging deep into the morphospace. #CBIAS2025
- Next up @cellmorphosero.bsky.social from @uniofbath.bsky.social talking about EDITS: event detection in time and space #CBIAS2025
- Try EDITS yourself: github.com/guillermocom... #CBIAS2025
- Next to @afoix.bsky.social from @virginieuhlmann.bsky.social lab @ebi.embl.org talking about data-driven shape qualification for 2D microscopy Images
- #CBIAS2025 ShapeEmbedLite stay tuned for a new preprint coming out soon.
- Now on to tech talks, starting with www.syglass.io #CBIAS2025
- Followed by indicalab.com #CBIAS2025
- Starting session 5 on research integrity and reproducibility, chaired by @makaefer.bsky.social from @cci-liv.bsky.social first speaker is @helenajambor.bsky.social talking about data visualisation for life sciences #CBIAS2025
- Emotional response is invoked before the cognitive response which can be harnessed to make graphs and data more memorable #CBIAS2025
- #CBIAS2025 Checklists to improve figures for publications derived from community consensus www.nature.com/articles/s41...
- Second speaker is @teunhuijben.bsky.social from @loicaroyer.bsky.social group at @czbiohub.bsky.social #CBIAS2025 Tracking is hard because segmentation is hard, especially in whole zebra fish embryos: Ultrack can help github.com/royerlab/ult...
- Once the tracking is done, visualise in inTRACKtive github.com/royerlab/inT... #CBIAS2025
- Last speaker of the session Ilaria Testa of @scilifelab.se from @kthuniversity.bsky.social on imaging very small things with high dynamics. #CBIAS2025
- Overcoming Nyquist-Shannon limitation with deep learning #CBIAS2025
- On to session six of #CBIAS2025 chaired by @olatznv.bsky.social from @imperialcollegeldn.bsky.social first speaker is Kimberly Meechan from @ucl.ac.uk introducing the HEFTIE project: tools and training for getting started with OME-ZARR
- Some more information and background reading #CBIAS2025
- Second speaker is @jytinevez.bsky.social from @institutpasteur.bsky.social introducing TrackMate 8 #CBIAS2025Nov 25, 2025 14:17
- Lots of new features in TrackMate but with that comes increased uncertainty: which one is the right one? #CBIAS2025
- The TrackMate helper is there to do just that. #CBIAS2025
- Last but not least: Samantha Ahern from the Society of Research Software #CBIAS2025
- Second #CBIAS2025 panel discussion on Interdisciplinary collaboration in bioimage analysis chaired by @virginieuhlmann.bsky.social panellists are @candiceroufosse.bsky.social from @imperialcollegeldn.bsky.social Andy French from @uniofnottingham.bsky.social and Amir Patel from @ucl.ac.uk
- @david-j-barry.bsky.social and @lankylaste.bsky.social wrapping up
